In bash you can also use 'here-strings': trjconv ... <<< 0
Quite similar to using echo, though. Cheers, Tsjerk On Feb 3, 2012 3:17 PM, "lina" <lina.lastn...@gmail.com> wrote: On Friday 03,February,2012 10:02 PM, francesca vitalini wrote: > > Sure! > My code is > > #!/bin/bas... try touch a file as index.txt and put 0 in the index.txt trjconv -f ../xtc/300-${i}.xtc -s ../../dynamin_dimer_phfitted.**pdb -o ../cg_gro/300-${i}.gro -pbc < index.txt > done > > very stupidly I just need to type 0 all the time in the interactive > window that trjco... > Thanks > > 2012/2/3 lina <lina.lastn...@gmail.com > <mailto:lina.lastname@gmail.**com<lina.lastn...@gmail.com> > >> > > > > On Friday 03,February,2012 09:56 PM, francesca vitalini wrote: > > > Yes but those tips... > <mailto:mark.abra...@anu.edu._**_au <mailto:mark.abra...@anu.edu.** > au <mark.abra...@anu.edu.au>>>> > > > > > On 4/02/2012 12:21 AM, francesca vitalini wrote: > > > Hi! > ... > http://www.gromacs.org/____**Documentation/How-tos/Using___** > __Commands_in_Scripts<http://www.gromacs.org/____Documentation/How-tos/Using_____Commands_in_Scripts> > <http://www.gromacs.org/__**Documentation/How-tos/Using___** > Commands_in_Scripts<http://www.gromacs.org/__Documentation/How-tos/Using___Commands_in_Scripts> > > > > > > < > http://www.gromacs.org/__Documentation/How-tos/Using___Commands_in_Scripts> > <ht... > <mailto:gmx-users@gromacs.org <mailto:gmx-users@gromacs.org>**> > > http://lists.gromacs.org/____**mailman/listinfo/gmx-users<http://lists.gromacs.org/____mailman/listinfo/gmx-users> > > <http://lists.gromacs.org/__**mailman/listinfo/gmx-users<http://lists.gromacs.org/__mailman/listinfo/gmx-users> > > > > > > <http://lists.gromacs.org/__mailman/listinfo/gmx-users > > <http://lists.gromacs.or... > > http://www.gromacs.org/____**Support/Mailing_Lists/Search<http://www.gromacs.org/____Support/Mailing_Lists/Search> > > <http://www.gromacs.org/__**Support/Mailing_Lists/Search<http://www.gromacs.org/__Support/Mailing_Lists/Search> > > > > > > <http://www.gromacs.org/__Support/Mailing_Lists/Search > > <http://www.gromacs.org/... > <mailto:gmx-users-request@__gr**omacs.org <http://gromacs.org> > > > <mailto:gmx-users-requ...@gromacs.org>>. > Can't > post? Read > > http://www.gromacs.org/____**Support/Mailing_Lists<http://www.gromacs.org/____Support/Mailing_Lists> > > <http://www.gromacs.org/__**Support/Mailing_Lists<http://www.gromacs.org/__Support/Mailing_Lists> > > > > > <http://www.gromacs.org/__Support/Mailing_Lists > < > http://www.gromacs.org/Support/M... > -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-u...
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