Hi I am having problems installing gromacs on cygwin using autoconf so I used cmake instead. I used the following option with cmake: cmake GMX_PREFER_STATIC_LIBS=ON ../gromacs-4.5.4 followed by make and make install. Gromacs installed finally without complaints. gromacs installs but I get the following error when I try to run the different gromacs executables: trjconv gives /usr/local/gromacs/bin/trjconv.exe: error while loading shared libraries: cyggmx/usr/local/gromacs/bin/trjconv.exe:cyggmx ana-6.dll: cannot open shared object file: No such file or directory gmxcheck gives: /usr/local/gromacs/bin/gmxcheck.exe: error while loading shared libraries: cyggm xpreprocess-6.dll: cannot open shared object file: No such file or directory Is there a way around this. I mainly need gromacs on my laptop for all the analysis routines and not to run md sims. Thanks for any and all help. Vijaya
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