it seesm to be good.
just one pieces of advices, why not use CHARMM36 for this tutorial ?
since it is the best FF for lipids currently.
On 04/26/2012 11:14 AM, Anirban Ghosh wrote:
Hi ALL,
I have prepared a step-wise tutorial for running a MD simulation of a
GPCR protein inserted in a lipid bilayer. It can be found at the
following URL:
https://sites.google.com/site/anirbanzz/gpcr-gromacs-tutorial
I sincerely hope it will help people who are new to such simulations
and the GROMACS community in general. This tutorial is adapted from
the membrane protein tutorial prepared by Justin Lemkul.
Regards,
Anirban
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