Hi Thales, Amber 1.5? You mean Amber12 and ambertools12?
I haven't test with them yet, but it would help me if you run in the debug mode and post the output here for me: acpype -di proteinname.mol2 -c user Thanks, Alan On 26 April 2012 19:02, Thales Kronenberger <kronenberg...@gmail.com> wrote: > I configure Amber1.5 and installed the Acpype compatible (the tests went > pretty well) > > BUT when I tried to submit my own job by the line > > acpype -i proteinname.mol2 -c user > > i got the message: > > ============================== > ================================================================= > | ACPYPE: AnteChamber PYthon Parser interfacE v. 2011-12-19 11:11:36Z Rev: > 373 (c) 2011 AWSdS | > > =============================================================================================== > ACPYPE FAILED: [Errno 2] No such file or directory: 'tmp' > Total time of execution: less than a second > laboratorio24@laboratorio24-desktop:~/dinamicas/ATP$ > > it's my first time so take it easy pls ;) > > > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to gmx-users-requ...@gromacs.org. > Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > -- Alan Wilter SOUSA da SILVA, DSc Bioinformatician, UniProt - PANDA, EMBL-EBI CB10 1SD, Hinxton, Cambridge, UK +44 1223 49 4588
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