On Tue, May 15, 2012 at 11:48 AM, rama david <ramadavidgr...@gmail.com>wrote:
> > Thank you ANIRBAN for your reply .. > > >> I think its better to remove the periodicity when you are going to start >> a fresh simulation with this protein. >> Could you told me how to remove the periodicity ??? >> > You can use trjconv with "-pbc mol -ur compact" options. But first look into trjconv -h -Anirban > > >> >>> Thank you in advance ... >> >> > >> >> > > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to gmx-users-requ...@gromacs.org. > Can't post? Read http://www.gromacs.org/Support/Mailing_Lists >
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