On 5/16/12 5:57 AM, bunty xy wrote:
Hello Friends
I have installed GROMACS 4.5.5 on linux.
I put the DSSP Executable in /usr/local/bin
when i run the following command:
do_dssp -s md.tpr -f md.trr -b 40 -e 50 -o fws_ss.xpm


i got the following error.
Reading file md.tpr, VERSION 4.5.5 (single precision)
Reading file md.tpr, VERSION 4.5.5 (single precision)
Segmentation fault


Please tell me how can i resolve this " Segmentation fault"   error.

This same question was posed just a little bit earlier. You need to make sure you're using the right version of DSSP (the old one).

-Justin

--
========================================

Justin A. Lemkul, Ph.D.
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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