Dear GMX-users, I am trying to use g_polystat in order to calculate persistence length of DNA oligomer, 60bp. From g_polystat -h I understood that this function provides the persistence length measures in number of bonds between consequtive atoms making DNA backbone. Using this function I obtain an average number of bonds equal to 0.3. What can this mean? Does it mean that the length of one bond is larger than DNA persistence length? Could anyone explain me please how I can properly interpret the "number of bonds" which is the output parameter of g_polystat? Thank you.
Regards, Leandro -- View this message in context: http://gromacs.5086.n6.nabble.com/g-polystat-tp4997678.html Sent from the GROMACS Users Forum mailing list archive at Nabble.com. -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
