Dear Gmx Users, My system is made of 3 proteins. As I want to use distance restraints dynamics between atoms belonging to each of them I have to produce topoloy with one moleculetype. I used pdb2gmx -chainsep interactive (I used merge: yes).
Then when I process to grompp the error: "unknown cmap torsion between atoms ......." These atoms belong to the last residue of the chain A and to the first residue of Chain B. How to get rid of this? Please, help. Steven
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