On 12/06/2012 3:18 PM, tarak karmakar wrote:
Dear All ,
I am facing problem in matching the coordinates number in this two
files, em.gro and toplogy.top.
I have tried with changing the number of solvents, adding ions (Na+)
....but in vain
_Note :: My system has ' -1.00 ' charge .......so I have added one
Sodium ion_
So can anyone please get me out of this trouble ???
Fatal error:
number of coordinates in coordinate file (em.gro, 64506)
does not match topology (toplogy.top, 64504)
Probably you didn't use genion properly, but unless you show us your
command lines and [molecule] section, we can't help.
Mark
--
/*Tarak Karmakar
Molecular Simulation Lab.
Chemistry and Physics of Materials Unit
Jawaharlal Nehru Centre for Advanced Scientific Research
Jakkur P. O.
Bangalore - 560 064
Karnataka, INDIA
Ph. (lab) : +91-80-22082809 */
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