To check it, please enter commands as below: #grompp_d or #mdrun some options appear and at the end you will get an error that .top file was not found!
For the second question, if you don't get the .tpr file it means you have not generate a correct simulation( however I don't now what the exact reason is). The final outputs are: .trr , .tpr and .edr. Sincerely, Shima ________________________________ From: Ali Alizadeh <ali.alizadehmoja...@gmail.com> To: gmx-users@gromacs.org Sent: Tuesday, July 24, 2012 11:13 AM Subject: [gmx-users] What is The gromacs tutorial output files? Dear all user, I'm a gromacs beginner and have a quick question. I installed gromacs 4.5.5 online on ubuntu12.04. How do I check that it is correctly installed? and, What is The gromacs tutorial output files? I could not get them tpr file. Please help me. -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Only plain text messages are allowed! * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Only plain text messages are allowed! * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists