Hi Mark, I haven't been able to figure out the reason of the difference between the two structures. When I prompt for my backbone to be fitted against each other, the initial structure has 2965 elements and the final output file has 2955 elements. Could you please suggest the possible reason for the difference?
On Sun, Sep 16, 2012 at 3:03 PM, Mark Abraham <mark.abra...@anu.edu.au> wrote: > On 16/09/2012 11:49 PM, Ankita naithani wrote: >> >> Hi, >> >> I am trying to use g_confrms to compare my initial and final structure >> and fit them on their backbone. However, I notice a difference of 10 >> atoms in both of these structures and so I am unable to use g_confrms. >> Can anyone please help me and advice me regarding this as the manual >> does mention about using g_confrms irrespective of the number of >> atoms. > > > Why are the two things you are trying to compare not the same? > > Mark > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > * Please don't post (un)subscribe requests to the list. Use the www > interface or send it to gmx-users-requ...@gromacs.org. > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists -- Ankita Naithani -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
