Thank you very much for your answer. I managed it now to get the right index groups.
> The selections are boolean (like a search). > > So to include both 6 and 7 you would use 6 | 7 (make the selection of 6 or > 7) > > so you probably want something like ! res65 | ! res 6 etc. > > > On 2012-09-18 10:56:14AM +0200, > reising...@rostlab.informatik.tu-muenchen.de wrote: >> Hi everybody, >> I want to make two index groups for my protein. The first one should >> contain the whole protein except of the residues : >> TYR65, Pro6, Phe7, Tyr61, Arg64, Tyr80 >> >> I tried it with the arguments: >> "protein" &! res 65 &! res 6 &! res 7 &! res 61 &! res 64 &! res 80 >> "protein" &! res 65 6 7 61 64 80 >> >> Both didn't work. >> >> The other index group should only contain the residues: >> TYR65, Pro6, Phe7, Tyr61, Arg64, Tyr80 >> >> Here I tried: >> res 6 & res 7 & res 61 & res 64 & res 65 & res 66 >> >> This worked. >> >> So I don't understand why the negation of this command did not work in >> the >> first index group. >> >> Can you please help me? >> >> Thank you, >> Eva >> >> -- >> gmx-users mailing list gmx-users@gromacs.org >> http://lists.gromacs.org/mailman/listinfo/gmx-users >> * Please search the archive at >> http://www.gromacs.org/Support/Mailing_Lists/Search before posting! >> * Please don't post (un)subscribe requests to the list. Use the >> www interface or send it to gmx-users-requ...@gromacs.org. >> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > -- > ================================================================== > Peter C. Lai | University of Alabama-Birmingham > Programmer/Analyst | KAUL 752A > Genetics, Div. of Research | 705 South 20th Street > p...@uab.edu | Birmingham AL 35294-4461 > (205) 690-0808 | > ================================================================== > > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > * Please don't post (un)subscribe requests to the list. Use the > www interface or send it to gmx-users-requ...@gromacs.org. > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
