On 10/6/12 10:52 AM, Shima Arasteh wrote:

# grep -c P popc-solv.gro
1628

What should I do with this number?


The letter "P" can theoretically match a lot of lines in a POPC system. Be sure you're grepping for a specific atom name, rather than something that can match both atom and residue names.

-Justin

--
========================================

Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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