On 10/29/12 12:54 PM, vidhya sankar wrote:
Dear justin Thank you For your Previous reply,
I
am deleting The Water Molecules using keepbyz script as mailed me
I want to keep waters around the head groups of my lipid, so
How to Choose wisely upperz and lowerz values to my system ?
These are the upper and lower bounds of the membrane; generally one would choose
some representative atom of the headgroup, like phosphorus. It's not an exact
science.
-Justin
--
========================================
Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
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