On 11/5/12 11:52 PM, harshaljain950 wrote:
Dear all,
I am a final year undergrauate student and a novice in GROMACS.
I want 3-4 layers of Carbon atoms to be added one over the other in my box
starting from Z=0 to Z=(3-4 carbon diameter). How can I do that. Please help
me out
genconf -nbox can be used to create grids of atoms, and editconf -center can be
used to place any sets of atoms at any given location in the box.
-Justin
--
========================================
Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
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