On 11/20/12 2:13 AM, cuong nguyen wrote:
Dear,
Thanks a lot for your suggestion Justin.
I have a box 3 3 20 and want to plot the temperature along the z axis. I
did the commands:
g_energy -f NVT_20ns.edr -s topol.top -o temp
g_analyze -f temp.xvg -dist temp.xvg
and got the results:
281.9 0 282 0.000149997 282.1 0 282.2 0 282.3 0 282.4 0 282.5 0
282.6 0 282.7 0 282.8 0 282.9 0 283 0 283.1 0 283.2 0 283.3 0 283.4
0 283.5 0 283.6 0 283.7 0.000149997 283.8 0 283.9 0 284 0 284.1
0.000149997 284.2 0 284.3 0.000149997
.........
I supposed the first column should start from 0 to 20.
Please tell me what's wrong I am doing?
g_energy does not plot quantities as a function of box length.
-Justin
--
========================================
Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
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