Dear Justin Thanks for your answer.
I know what you mean, but the problem is that this is not a possible physical (real) behaviour. If the temperature is not controlled as you said, the energy should continue growing not stop, but in these case after 50ps it reaches some kind of equilibrium and stabilize. So why this is happening? Can you give me with a Physical or and Algorithmic answer? Thanks John Michael -- View this message in context: http://gromacs.5086.n6.nabble.com/About-Temperature-coupling-and-Energy-Transfer-tp5003151p5003307.html Sent from the GROMACS Users Forum mailing list archive at Nabble.com. -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
