Hi Justin, I am trying to install gromacs-4.5.5 on a Linux work station (x86_64) but I am getting an error. The error message is attached in the mail in a text file "Installation_error.txt".
I have installed fftw-3.3.3 in my system. I have checked threads on the mailing list which have reported the same error and have also followed whatever solution has been provided but unfortunately its still not successful. Now I am at a fix .... Could you please suggest me what should I do next for successfully installing gromacs on my machine? could it be some compatibilty issue or m I missing out something crucial? - Bharati Bharati Dutta Research Associate Discovery Informatics Piramal Life Sciences Limited 1, Nirlon Complex, Goregaon Link Road, Goregaon(E) Mumbai, Maharashtra 400 063 India [email protected] This communication may contain information that is proprietary confidential or exempt from disclosure. If you are not the intended recipient please note that any other dissemination distribution use or copying of this communication is strictly prohibited. Anyone who receives this message in error should notify the sender immediately by telephone or by return e-mail and delete it from his or her computer.
/usr/bin/ld: /usr/local/lib/libfftw3f.a(mapflags.o): relocation R_X86_64_32 against `a local symbol' can not be used when making a shared object; recompile with -fPIC /usr/local/lib/libfftw3f.a: could not read symbols: Bad value collect2: ld returned 1 exit status make[3]: *** [libmd.la] Error 1 make[3]: Leaving directory `/home/gromacs-4.5.5/src/mdlib' make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory `/home/gromacs-4.5.5/src' make[1]: *** [all] Error 2 make[1]: Leaving directory `/home/gromacs-4.5.5/src' make: *** [all-recursive] Error 1
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