Sincerely, Shima
----- Forwarded Message ----- From: Shima Arasteh <shima_arasteh2...@yahoo.com> To: Dariush Mohammadyani <d.mohammady...@gmail.com> Sent: Sunday, December 16, 2012 5:03 PM Subject: Re: [gmx-users] Energy minimization It's printed in terminal, exactly before showing the values of infinite potential and Max Force and .... . Sincerely, Shima ________________________________ From: Dariush Mohammadyani <d.mohammady...@gmail.com> To: Shima Arasteh <shima_arasteh2...@yahoo.com> Sent: Sunday, December 16, 2012 5:01 PM Subject: Re: [gmx-users] Energy minimization Hi Shima, Just for my knowledge, how did you find the clashed atom? Thanks, Dariush On Sun, Dec 16, 2012 at 12:19 AM, Shima Arasteh <shima_arasteh2...@yahoo.com> wrote: are protein ( atom 288) and lipid chain. I think if I move them, I may get some other clashes, may I not? >Any other suggestion? > >Thanks. > > -- ============================ Dariush Mohammadyani Ph.D Student Department of Bioengineering University of Pittsburgh Pittsburgh, USA -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
