Very frequently it helps just to do some searches by your own and read _carefully_ the documentation:

http://www.gromacs.org/Documentation/How-tos/Extending_Simulations?highlight=extend

On 02/14/2013 08:13 AM, James Starlight wrote:
Dear Gromacs Users!

I have completed 100ns md trajectory.

I 'd like to go on that simulation adding extra 100 ns to the existing
trajectory (with appending of both trajectories in single file during
that simulation)

If I do it just via

mdrun -v -cpi md  -deffnm md
the simulation have not gone on because the simulation time defined in
mdp file was over.


on contrary if I define new mdp file via grompt the second trajectory
save in the another file


Does it possible to continue simulation in the existing file?

James

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