As I found up to now, func 2 is related to improper dihedrals. How can I find improper dihedrals? Can I not add them?
Sincerely, Shima ----- Original Message ----- From: Shima Arasteh <shima_arasteh2...@yahoo.com> To: Discussion list for GROMACS users <gmx-users@gromacs.org> Cc: Sent: Tuesday, March 19, 2013 9:46 PM Subject: [gmx-users] Function of dihedrals in top file Dears, There is term of function for each 4 atoms in dihedral section in top file. How this function is defined? To add extra dihedrals manually, I need to add function too. Thanks. Sincerely, Shima -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists