Dear All, I carry out inserting a protein into lipid membrane by using g_membed tool. But i have errors :
Fatal error: (i) Something is wrong with your membrane. Max and min z values are 12.150000 and 0.010000. (ii) Maybe your membrane is not centered in the box, but located at the box edge in the z-direction, so that one membrane is distributed over two periodic box images. (iii) Another possibility is that your water layer is not thick enough. I checked error (i) by using g_energy to get boxz-size. I do not get min z value 0.010000. I sure that my water layer is thick enough. About error (ii), i put the membrane in the center of the box. Unfortunately, after my these solutions, the errors still remain. What should i do now ? Thankful for any help ! Best regards, Thu -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
