Hi Justin, Do I have to read less frames to circumvent the problem? I know g_density has been used for this purpose so there should be a way to resolve this. I am reading 1000 frames...
Thanks On 2 April 2013 12:40, Justin Lemkul <jalem...@vt.edu> wrote: > > > On 4/2/13 11:57 AM, Elisabeth wrote: > >> Dear all, >> >> I am trying to get the density profile for my liquid-vacuum interface >> using >> g_density -f trr -s tpr however g_density gives Segmentation fault. Does >> anyone had clue what could be wrong? Please comment, Thanks. >> >> Group 0 ( System) has XXX elements >> Group 1 ( Other) has XXX elements >> >> Select a group: 0 >> Selected 0: 'System' >> trn version: GMX_trn_file (single precision) >> Last frame 100000 time 10000.000 >> Segmentation fault >> >> > Segmentation faults are generic memory errors. Without a debugging > backtrace, there's very little to suggest. > > -Justin > > -- > ==============================**========== > > Justin A. Lemkul, Ph.D. > Research Scientist > Department of Biochemistry > Virginia Tech > Blacksburg, VA > jalemkul[at]vt.edu | (540) 231-9080 > http://www.bevanlab.biochem.**vt.edu/Pages/Personal/justin<http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin> > > ==============================**========== > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/**mailman/listinfo/gmx-users<http://lists.gromacs.org/mailman/listinfo/gmx-users> > * Please search the archive at http://www.gromacs.org/** > Support/Mailing_Lists/Search<http://www.gromacs.org/Support/Mailing_Lists/Search>before > posting! > * Please don't post (un)subscribe requests to the list. Use the www > interface or send it to gmx-users-requ...@gromacs.org. > * Can't post? Read > http://www.gromacs.org/**Support/Mailing_Lists<http://www.gromacs.org/Support/Mailing_Lists> > -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists