В письме от 15 мая 2013 08:41:14 пользователь Андрей Гончар написал: > I know, but on target machine there is a gcc compilator version 4.1, and on > gromacs site they told that this version is broken and 4.5 should used > instead. So I try to compile it on machine with 4.5 version of gcc >
You can build gcc on target machine for example. also to simplify build you can take a look a http://prefix.gentoo.org for example. > > 2013/5/15 Alexey Shvetsov <ale...@omrb.pnpi.spb.ru> > > > В письме от 15 мая 2013 00:11:49 пользователь Андрей Гончар написал: > > > Hi. I'm trying to static compile gromacs from source, everything goes > > > > well, > > > > > but when I > > > move it to another machine and try to launch mdrun I got a message: > > > > > > mdrun: error while loading shared libraries: libfftw3f.so.3: cannot open > > > shared object file: No such file or directory > > > > > > I run ./configure with the following options: > > > > > > ./configure --prefix=$PREF --enable-all-static --with-x=no --enable-mpi > > > --without-xml --disable-shared --with-fft=fftw3 > > > > > > The goal is to compile gromacs on one computer and to use it on another. > > > > I > > > > > haven't root privileges on another machine so I decided to make a > > > statically linked instance of gromacs, copy it to another computer and > > > > use > > > > > it from my home directory. > > > > You dont need root privileges to install gromacs for example in > > ${HOME}/usr > > also its good idea to build gromacs on target machine > > -- > > Best Regards, > > Alexey 'Alexxy' Shvetsov > > Petersburg Nuclear Physics Institute, NRC Kurchatov Institute, > > Gatchina, Russia > > Department of Molecular and Radiation Biophysics > > Gentoo Team Ru > > Gentoo Linux Dev > > mailto:alexx...@gmail.com > > mailto:ale...@gentoo.org > > mailto:ale...@omrb.pnpi.spb.ru > > -- > > gmx-users mailing list gmx-users@gromacs.org > > http://lists.gromacs.org/mailman/listinfo/gmx-users > > * Please search the archive at > > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > > * Please don't post (un)subscribe requests to the list. Use the > > www interface or send it to gmx-users-requ...@gromacs.org. > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists -- Best Regards, Alexey 'Alexxy' Shvetsov Petersburg Nuclear Physics Institute, NRC Kurchatov Institute, Gatchina, Russia Department of Molecular and Radiation Biophysics Gentoo Team Ru Gentoo Linux Dev mailto:alexx...@gmail.com mailto:ale...@gentoo.org mailto:ale...@omrb.pnpi.spb.ru
signature.asc
Description: This is a digitally signed message part.
-- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists