Thank you for this. I run this simulation from scratch, will try it next time thought.
Steven On Tue, Jun 25, 2013 at 11:26 AM, lloyd riggs <lloyd.ri...@gmx.ch> wrote: > I had this some time ago and cant remember everything, other than its a > format problem. My end solution that worked was to simply cut and past in > columns the entire pullf into one .xvg, say in gnumeric retaining an > origional header, than read it into xmgrace, and then just write it out > from xmgrace again to file xxx.xvg then it worked. I still could not find > out why, and spent hours making sure everthing had same space numbers, or > tab spacing, or etc...the only thing I noted was with xmgrace theirs a & or > something at the end, but putting even this in manually to the files did > not work...dont know if that helps... > > Stephan > > *Gesendet:* Dienstag, 25. Juni 2013 um 10:48 Uhr > *Von:* "Steven Neumann" <s.neuman...@gmail.com> > *An:* "Discussion list for GROMACS users" <gmx-users@gromacs.org> > *Betreff:* [gmx-users] Can't read 1048576 bytes of 'pullx500.xvg' to > compute checksum. > Dear Users, > > I know this error has been discussed many times but the outcome from > mdrun -pf and -px stopped at the same time which is 39470 ps. Somehow > gromacs caanot read pullx500.xvg but no clue why. I tried dos2gmx and still > the same error occur. > > As I do not care about pullx500.xvg I run grompp again to change the tpr > file and set pull_nstxout = 0 then run from the checkpoint but then the > error occurs that 4 out of 5 files to append are only present. > > Can you advise please? > > Steven > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > * Please don't post (un)subscribe requests to the list. Use the > www interface or send it to gmx-users-requ...@gromacs.org. > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > * Please don't post (un)subscribe requests to the list. Use the > www interface or send it to gmx-users-requ...@gromacs.org. > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists