Hi, I simulated protein ligand complex for 20 ns now i want to visualize this complex after simulation in pymol.To look ligand interactions with protein binding site
I tried trjconv to convert .xtc trajectory to .pdb but xtc file is too huge with solvent molecules so pymol couldnot visualize complex Can anybody tell me command how to visualize protein ligand complex trajectory in pymol Thanks, Sainitin -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
