Following link might be helpful: http://orbeckst.github.io/GromacsWrapper/gromacs/core/fileformats/xpm.html
-g -- Gaurav Goel Assistant Professor Department of Chemical Engineering Indian Institute of Technology, Delhi Hauz Khas, New Delhi 110016 India On 02-Jul-2013, at 10:45 AM, Richa Singh <richa.s.rathor...@gmail.com> wrote: > Hello users, > > I'm using g_rms to compare my actual trajectory obtained from > simulation with the filtered trajectory (along given set of > eigenvectors), this gives me an RMSD comparison matrix in xpm format > where the values of the plot are not clear. Is there any way which can > help me to get the values along the diagonal of the matrix? > the command that i followed is: > g_rms -s ref.tpr -f actual.xtc -f2 filtered.xtc -m rmsd.xpm > > I want to calculate the trace of the matrix basically. > > > Regards.. > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > * Please don't post (un)subscribe requests to the list. Use the > www interface or send it to gmx-users-requ...@gromacs.org. > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
