Actually, http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin/gmx-tutorials/ there are two different manuals - one about free energy calculation and other about protein ligand complexes.
This page is also can be helpfull http://www.alchemistry.org/wiki/Category:Free_Energy_How-to%27s 2013/9/19 Naga Sundar <naga25sun...@gmail.com> > Dear Gromacs users > > -- Iam trying to perform free energy calculation for > protein-ligand complex. > --Can any one plz suggess an appropriate tutorial to be > follow to perform this analysis > -- > Thanks & Regards > N.NagaSundaram > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > * Please don't post (un)subscribe requests to the list. Use the > www interface or send it to gmx-users-requ...@gromacs.org. > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > -- Sergey Filkin, Researcher -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists