No, there's no way to do that. But you can monitor the output trajectory file yourself, live.
Mark On Thu, Sep 26, 2013 at 4:49 PM, Dr. Vitaly Chaban <vvcha...@gmail.com> wrote: > Unlikely possible... But yeah, the feature might be handy. > > > Dr. Vitaly V. Chaban > > > On Thu, Sep 26, 2013 at 4:20 PM, grita <cemilyi...@arcor.de> wrote: >> Hi guys, >> >> Is it possible to specify in the topol.top file preprocessor statements, so >> that you can stop the simulation prematurely? >> >> I pull two molecules together and I'd like to stop the simulation if the >> center of mass distance of the molecules is less than xx nm. >> >> Best, >> grita >> >> -- >> View this message in context: >> http://gromacs.5086.x6.nabble.com/Preprocessor-statements-tp5011469.html >> Sent from the GROMACS Users Forum mailing list archive at Nabble.com. >> -- >> gmx-users mailing list gmx-users@gromacs.org >> http://lists.gromacs.org/mailman/listinfo/gmx-users >> * Please search the archive at >> http://www.gromacs.org/Support/Mailing_Lists/Search before posting! >> * Please don't post (un)subscribe requests to the list. Use the >> www interface or send it to gmx-users-requ...@gromacs.org. >> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > * Please don't post (un)subscribe requests to the list. Use the > www interface or send it to gmx-users-requ...@gromacs.org. > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
