On 10/3/13 4:15 PM, Ehsan Sadeghi wrote:
Thanks Justin. I will try different bond parameters. I usually use PyMol or
Chimera for visualization. Do you have any recommendation for a visualization
software?
For quick visualization, VMD (but it often gets bonds wrong if they are not in
line with its assumptions) and for rendering images and movies, PyMOL. It's all
a matter of personal preference. None of them is perfect.
-Justin
--
==================================================
Justin A. Lemkul, Ph.D.
Postdoctoral Fellow
Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 601
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201
jalem...@outerbanks.umaryland.edu | (410) 706-7441
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