And apparently you have only 6438 atoms in system_inflated.gro. So that is the source of the error.
>-----Original Message----- >From: gmx-users-boun...@gromacs.org [mailto:gmx-users- >boun...@gromacs.org] On Behalf Of hasthi >Sent: 08 October 2013 05:56 >To: gmx-users@gromacs.org >Subject: [gmx-users] Regarding lipid bilayer > >Dear All, > I am trying to follow lipid bilayer simulation tutorial,I am > getting struck at >energy minimization same step after generating system_inflated.gro file. I get >the same error, > >Fatal error: >Invalid line in system_inflated.gro for atom 6439: > 25.67360 25.77400 6.59650 >I checked my system_inflated.gro and system.gro files too, the number of >atoms in the second line are 6538 and 17503 respectively. > >I cannot figure out this error. Please help me in fixing this issue. > >Regards, >V.Hasthi >Student >-- >gmx-users mailing list gmx-users@gromacs.org >http://lists.gromacs.org/mailman/listinfo/gmx-users >* Please search the archive at >http://www.gromacs.org/Support/Mailing_Lists/Search before posting! >* Please don't post (un)subscribe requests to the list. Use the www interface >or send it to gmx-users-requ...@gromacs.org. >* Can't post? Read http://www.gromacs.org/Support/Mailing_Lists -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
