On Friday, 17 June 2016 02:59:49 UTC+3, kortschak wrote:
>
> I'm running a terabyte-scale (minor compiler changes are necessary to get 
> this to run) genome resequencing simulation at the moment and an 
> interesting question has arisen.
>
The simulation involved hashing over ~all positions of a genome, either 
> with the key being a string or a [2]string. 
>

Interesting :)

Note there might be better data-structures for this than the built-in map. 
Do you have the code uploaded with some example which uses under 8GB of 
memory? Or a description how the algorithm works?

The difference in the resident memory size for the entire program for these 
> two cases is about a factor of two.
>
> What is an estimate of the contribution of key size to the number of bytes 
> required per element for a map?
> -- 
> afk
> Dan
>

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