Chris 

I have tried this but it only seems to work for 4 queries eg in the example 
below I have commented out two "where polygonOptions" 
This means D = 06 works 

But if I remove the comment for '01' then '06' stops working ;(


  layer = new google.maps.FusionTablesLayer({
        query: {
          select: 'g',
          from: '642752'
        },
        styles: [{
          polygonOptions: {
            fillOpacity: 0.3
          } 
}, 
//{
        //  where: "D  = '01'",
        //  polygonOptions: {
        //    fillColor: "#00FF00"
        //  }
        //}, 
//{
        //  where: "D  = '02'",
        //  polygonOptions: {
        //    fillColor: "#00FF00"
        //  }
        //}, 
{
          where: "D  = '03'",
          polygonOptions: {
            fillColor: "#0000FF"
          }
        }, 
{
          where: "D  = '04'",
          polygonOptions: {
            fillColor: "#0000FF"
          }
        }, 
{
          where: "D  = '05'",
          polygonOptions: {
            fillColor: "#0000FF"
          }
        }, 
{
          where: "D  = '06'",
          polygonOptions: {
            fillColor: "#00FF00"
          }
        } 
        ]
      });
  layer.setMap(map)

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