I believe the version of our cancer cases ontology on babel is outdated. However, I'm not sure our most recent version conforms to the standard paths you listed. You will need to forgive me as one of the people who helped with this is no longer on the team so I'm trying to put the pieces back together. I've attached a spreadsheet with the record output from our i2b2 ontology table for the example you provided. Would you mind creating a new line that represents what the correct values should be for each column? This would be a tremendous help in our efforts to correct it. Thanks.
Regards, Justin Dale Manager - Research Development and Support University of Minnesota Academic Health Center - Office of Information Systems Phone: 612.624.9747 Fax: 612.624.7458 jd...@umn.edu On Wed, Aug 12, 2015 at 11:44 AM, GPC Informatics <d...@madmode.com> wrote: > #329: UMN cancer tumor registry i2b2 path punctuation varies from HERON > design > -----------------------------------------------+--------------------------- > Reporter: dconnolly | Owner: jdale > Type: problem | Status: new > Priority: major | Milestone: cohort-char- > Component: data-stds | bc-db > Keywords: breast-cancer-cohort data-quality | Resolution: > Blocking: | Blocked By: > -----------------------------------------------+--------------------------- > Changes (by dconnolly): > > * priority: minor => major > * milestone: babel-lec2-prep => cohort-char-bc-db > > > Comment: > > This is critical path for the upcoming breast cancer data federation. > > -- > Ticket URL: < > http://informatics.gpcnetwork.org/trac/Project/ticket/329#comment:1> > gpc-informatics <http://informatics.gpcnetwork.org/> > Greater Plains Network - Informatics >
UMN Cancer Ontology - 0400 Skin.xlsx
Description: MS-Excel 2007 spreadsheet
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