#473: PCORnet CDMv3 SAS prep-to-research Readiness
-------------------------+------------------------------
Reporter: lv | Owner: prakashnadkarni
Type: enhancement | Status: closed
Priority: major | Milestone: data-domains3
Component: data-stds | Resolution: fixed
Keywords: | Blocked By: 381, 486
Blocking: 510 |
-------------------------+------------------------------
Changes (by dconnolly):
* status: assigned => closed
* resolution: => fixed
Old description:
> prep-to-research readiness is evaluated in two steps:
> 1. Diagnostic Query
> - official distribution is via popmednet
> - [https://github.com/PCORnet-DRN-OC/PCORnet-Diagnostic-Query
> PCORnet-DRN-OC/PCORnet-Diagnostic-Query] SAS code is available on github
> - results are due back to DRN-OC March 25th (see comment:24 for
> timeline details)
> 2. Data Characterization
> - official distribution is via popmednet
> - [https://github.com/PCORnet-DRN-OC/PCORnet-Data-Characterization
> PCORnet-DRN-OC/PCORnet-Data-Characterization] SAS code is available on
> github
> - results are due back to the DRN-OC April 8th (comment:24)
>
> Diagnostic Query (DQ) requirements:
>
> - CDM v3.0 with SAS data types
> - All 15 tables present
> - Demographic, Enrollment, Encounter, Diagnosis, Procedures, Vital, and
> Harvest tables populated
>
> Data Characterization requirements:
> - Successful diagnostic response, i.e. no exceptions noted (in the
> workplan they are described as “unexpected conditions”)
> - Locked/static data
> - Will need to submit an ETL ADD with their query response
> - the template is on the [https://pcornet.imeetcentral.com/drnoc-
> workgroups/doc/42875655/w-DataCharacterization Data Characterization
> wiki])
>
> The DRN shares schedule and tracking info via imeetcentral:
> - [https://pcornet.imeetcentral.com/drnoc-workgroups/file/43823210/
> Timeline Phase II Diagnostic and Data Characterization Queries.xlsx]
> - [https://pcornet.imeetcentral.com/drnoc-workgroups/file/43982772/
> phase II high-level tracking.xlsx]
>
> Research readiness (as opposed to prep-to-research readiness) should
> follow in one or more separate tickets. One reference on the whole
> process is a 5 Oct 2015 DRN OC presentation (ticket:266#comment:10); the
> Data Characterization wiki may have more up-to-date materials.
New description:
prep-to-research readiness is evaluated in two steps:
1. Diagnostic Query
- official distribution is via popmednet
- [https://github.com/PCORnet-DRN-OC/PCORnet-Diagnostic-Query
PCORnet-DRN-OC/PCORnet-Diagnostic-Query] SAS code is available on github
- results are due back to DRN-OC March 25th (see comment:24 for
timeline details)
2. Data Characterization
- official distribution is via popmednet
- [https://github.com/PCORnet-DRN-OC/PCORnet-Data-Characterization
PCORnet-DRN-OC/PCORnet-Data-Characterization] SAS code is available on
github
- results are due back to the DRN-OC April 8th (comment:24)
Diagnostic Query (DQ) requirements:
- CDM v3.0 with SAS data types
- All 15 tables present
- Demographic, Enrollment, Encounter, Diagnosis, Procedures, Vital, and
Harvest tables populated
Data Characterization requirements:
- Successful diagnostic response, i.e. no exceptions noted (in the
workplan they are described as “unexpected conditions”)
- Locked/static data
- Will need to submit an ETL ADD with their query response
- the template is on the [https://pcornet.imeetcentral.com/drnoc-
workgroups/doc/42875655/w-DataCharacterization Data Characterization
wiki])
The DRN shares schedule and tracking info via imeetcentral:
- [https://pcornet.imeetcentral.com/drnoc-workgroups/file/46229509/ DM
Status by both Data Characterization and DSA]
- [https://pcornet.imeetcentral.com/drnoc-workgroups/file/43823210/
Timeline Phase II Diagnostic and Data Characterization Queries.xlsx]
- [https://pcornet.imeetcentral.com/drnoc-workgroups/file/43982772/ phase
II high-level tracking.xlsx]
Research readiness (as opposed to prep-to-research readiness) should
follow in one or more separate tickets. One reference on the whole process
is a 5 Oct 2015 DRN OC presentation (ticket:266#comment:10); the
[https://pcornet.imeetcentral.com/drnoc-
workgroups/doc/42875655/w-DataCharacterization Data Characterization wiki]
may have more up-to-date materials.
--
Comment:
Nine GPC sites are Approved for PTR as of July 8: MCRF, KUMC, MCW, CMH,
UIOWA, UMN, UTHSCSA, UTSW, WISC
Let's track the others separately:
- #515 IU CDM lacks encounter-procedure data
- #517 MU CDM: No Access to DRN OC Resources
- #518 UNMC CDM: No Access to DRN OC Resources
ref
- [https://pcornet.imeetcentral.com/drnoc-workgroups/file/46229509/ DM
Status by both Data Characterization and DSA] Updated 7.8.16
--
Ticket URL:
<http://informatics.gpcnetwork.org/trac/Project/ticket/473#comment:99>
gpc-informatics <http://informatics.gpcnetwork.org/>
Greater Plains Network - Informatics
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