What else for tomorrow? Please excuse the delay; I spent a bunch of time dealing with input to HackathonFour. Thanks, everybody, for your thoughtful responses to the registration survey! Keep 'em coming.
* gpc-dev 20 Dev shared meeting notes<https://docs.google.com/document/d/16DuCzit_fpVzIXfJrElX28vEr97qhkQHj0qbXnxIBWI/edit?usp=sharing>; scribe: UTHSCSA current proposal: ________________________________ 1. Convene, take roll, review records and plan next meeting * Meeting ID and access code: 817-393-381<https://global.gotomeeting.com/meeting/join/817393381>; call +1 (571) 317-3131 * roll: all 12 DevTeams<https://informatics.gpcnetwork.org/trac/Project/wiki/DevTeams> represented? KUMC, CMH, UIOWA, WISC, MCW, MCRF, UMN, UNMC, UTHSCSA, UTSW, MU, IU Reminder - put institution after your name in GoToMeeting preferences * today's scribe: UTHSCSA * comments on the agenda? On last week’s notes? No. (#12<https://informatics.gpcnetwork.org/trac/Project/ticket/12>) Recent tickets opened/closed<https://informatics.gpcnetwork.org/trac/Project/timeline> - FYI (i.e. not intended for discussion) * #263 (Adaptable cohort query design and administration) reopened<https://informatics.gpcnetwork.org/trac/Project/ticket/263#comment:50> * #550 (Second wave of recruiting ADAPTABLE patients) created<https://informatics.gpcnetwork.org/trac/Project/ticket/550> * Next Meeting: cancel 27 Dec; meet 3 Jan; scribe: KUMC? Note LRU schedule<https://informatics.gpcnetwork.org/trac/Project/ticket/12#comment:92>, which nominates KUMC, … 2. Milestone:bariatric-study-data<https://informatics.gpcnetwork.org/trac/Project/milestone/bariatric-study-data> * #543 (UW Madison Bariatric query age calculation problem.)<https://informatics.gpcnetwork.org/trac/Project/ticket/543> closed fixed Let there be rejoicing. * FW: GPC PBS Table 1 - Data Checks Requested<http://listserv.kumc.edu/pipermail/gpc-dev/2016q4/003408.html> Buzalko, Russell J Due 30 Dec from MCRF, UTSW, WISC, UIOWA, KUMC 3. Milestone:cdm-refresh6<https://informatics.gpcnetwork.org/trac/Project/milestone/cdm-refresh6> ( Cycle 2 ) reply due 16 Dec * status updates * UNMC: approved Dec 6 #518<https://informatics.gpcnetwork.org/trac/Project/ticket/518> * KUMC: approved December 15 * #492 (How to Build SAS CDM v3 Medication Tables) closed<https://informatics.gpcnetwork.org/trac/Project/ticket/492#comment:31> “As far as I know, all sites have figured this out one way or another” * CMH: approved December 16, 2016 12:51 PM * UIOWA: Submitted?; status? * WISC: approved December 15, 2016 8:49 AM * MCW: approved December 06, 2016 2:52 PM * MCRF: submitted 16 Dec; status? * UMN: approved December 19, 2016 at 3:35 PM * UTHSCSA: approved December 19, 2016 3:09 PM * UTSW ? * MU approved December 07, 2016 8:28 AM #517<https://informatics.gpcnetwork.org/trac/Project/ticket/517> * IU: ? 4. Milestone:cohort-char-bc-db<https://informatics.gpcnetwork.org/trac/Project/milestone/cohort-char-bc-db> * WISC Language data is fixed * #297 * UIOWA: ETA Fri 16 Dec (comment:51<https://informatics.gpcnetwork.org/trac/Project/ticket/297#comment:51>) * MCW: ETA early to mid next week (week of 19 Dec) * UNMC: Jay Pedersen will take a look at records with red dots in GPC redcap (ref McDowell 13 Dec<http://listserv.kumc.edu/pipermail/gpc-dev/2016q4/003417.html>) * #480<https://informatics.gpcnetwork.org/trac/Project/ticket/480> Missing morphology values across several sites <https://informatics.gpcnetwork.org/trac/Project/ticket/480>MCRF ETA was Thu 15 Dec 5. Milestone:next-d<https://informatics.gpcnetwork.org/trac/Project/milestone/next-d> * #545<https://informatics.gpcnetwork.org/trac/Project/ticket/545> Study sample and DM sample definition for next-d <https://informatics.gpcnetwork.org/trac/Project/ticket/545>Alona clarifies 14 Dec: Producing Table 1 is part of the "data exploration" section. It will be very useful for understanding populations we have across [sites], and conditions we want to include in the final code * #551<https://informatics.gpcnetwork.org/trac/Project/ticket/551> next-D labs for cohort selection: fasting glucose, HbA1c <https://informatics.gpcnetwork.org/trac/Project/ticket/551>MCW folks, thoughts? * #544<https://informatics.gpcnetwork.org/trac/Project/ticket/544> how to convert ACS raw variables to CAP variables (e.g. type of health insurance)? <https://informatics.gpcnetwork.org/trac/Project/ticket/544>FYI: NEXT-D approach somewhat orthogonal to work to date 6. Milestone:snow-shrine-1<https://informatics.gpcnetwork.org/trac/Project/milestone/snow-shrine-1> * #459<https://informatics.gpcnetwork.org/trac/Project/ticket/459> How to add GPC sites to SNOW SHRINE network?<https://informatics.gpcnetwork.org/trac/Project/ticket/459> * “ETA for shine upgrade to 1.20: mid December” * KUMC started trying to use these docs. we can't reach the hub by ping nor TCP to 6443 Current status: request (to KUMC IT) is pending for a CentOS VM in the DMZ. * #460<https://informatics.gpcnetwork.org/trac/Project/ticket/460> SNOW SHRINE node at UTSW <https://informatics.gpcnetwork.org/trac/Project/ticket/460>News since 15 Nov? “should be ready to connect as soon as the hub is up on the latest version of shrine.” * News since 13 Sep from MCRF #531, UNMC #532? 7. HackathonFour<https://informatics.gpcnetwork.org/trac/Project/wiki/HackathonFour> 17-18 Jan 2017 at KUMC in Kansas City, KS * Agenda with details on times and topics due 3 Jan (T-2 weeks) * #431<https://informatics.gpcnetwork.org/trac/Project/ticket/431> Deploy free text notes and de-identification at majority of GPC sites (milestone 2.12.1) <https://informatics.gpcnetwork.org/trac/Project/ticket/431>Nov 28: “I'll start some discussion within the GPC-DEV list” Please do so in advance of the 3 Jan detailed agenda deadline! (goes for SHRINE / SNOW as well) * Registered: CMH, UTHSCSA, WISC, IU, MCRF, MCW, UIOWA, KUMC, UMN, MU, UNMC Not registered: UTSW * Please scribble site intro / overview thoughts in GPC Site Tools and Techniques<https://docs.google.com/presentation/d/1LkZNvjSEjXkCwo0a0rLigqlSFS_ZOHS8QQiJfL8K_-Q/edit#slide=id.g1ab798bdd4_0_8> slides ________________________________ -- Dan
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