Hi Susan,
I see outpatient hospital/physician billing CPT coding as follows for 
ventilation. 

94656 - INITIAL VENTILATOR MGMT
94657 - CONTINUOUS VENT
94660 - NIV/CPAP/BIPAP

However, hospitals will bill for mechanical ventilation and COVID patients are 
likely to be inpatient, so you could look for these ICD-10 procedure codes and 
Epic sites could try using the Epic-specific SQL below.

Assistance with Respiratory Ventilation, <24 Hrs, CPAP  5A09357
Assistance with Resp Ventilation, <24 Hrs, Intermit Pos Air     5A09358
Assistance with Resp Ventilation, <24 Hrs, Cont Neg Air 5A09359
Assistance with Resp Ventilation, <24 Hrs, Intermit Neg Air     5A0935B
Assistance with Respiratory Ventilation, <24 Hrs        5A0935Z
Assistance with Respiratory Ventilation, 24-96 Hrs, CPAP        5A09457
Assist with Resp Ventilation, 24-96 Hrs, Intermit Pos Air       5A09458
Assistance with Resp Ventilation, 24-96 Hrs, Cont Neg Air       5A09459
Assist with Resp Ventilation, 24-96 Hrs, Intermit Neg Air       5A0945B
Assistance with Respiratory Ventilation, 24-96 Hrs      5A0945Z
Assistance with Respiratory Ventilation, >96 Hrs, CPAP  5A09557
Assistance with Resp Ventilation, >96 Hrs, Intermit Pos Air     5A09558
Assistance with Resp Ventilation, >96 Hrs, Cont Neg Air 5A09559
Assistance with Resp Ventilation, >96 Hrs, Intermit Neg Air     5A0955B
Assistance with Respiratory Ventilation, >96 Hrs        5A0955Z

select peh.*
from fh_clarity_etl_src.pat_enc_hsp peh
join fh_clarity_etl_src.hsp_acct_px_list hapl on peh.hsp_account_id = 
hapl.hsp_account_id
join fh_clarity_etl_ref.cl_icd_px icdp on hapl.final_icd_px_id = icdp.icd_px_id

where hapl. final_icd_px_id IN ('76870', '76871', '76872', '76873', '76874', 
'76875', '76865'
        , '76876', '76866', '76877', '76867', '76878', '76868', '76879', 
'76869')
and peh.hosp_admsn_time::date > '2020-01-01'

Best,
Kris
(414) 416-2389 (cell)
 
Kristen Osinski, MS
Business Analyst, Biomedical Informatics
Clinical & Translational Science Institute
Medical College of Wisconsin
[email protected] (414) 805-7245 (office)
 

On 5/20/20, 8:21 AM, "Gpc-dev on behalf of [email protected]" 
<[email protected] on behalf of 
[email protected]> wrote:

    ATTENTION: This email originated from a sender outside of MCW. Use caution 
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    Today's Topics:

       1. COVID CDM Data Element:  Mechanical Ventilation (Susan Rea)
       2. RE: Add a discussion item to GPC-dev today (05/05/2020)
          (Mazumder, Narayana)


    ----------------------------------------------------------------------

    Message: 1
    Date: Tue, 19 May 2020 23:50:23 +0000
    From: Susan Rea <[email protected]>
    To: "[email protected]" <[email protected]>
    Subject: COVID CDM Data Element:  Mechanical Ventilation
    Message-ID:
            
<dm5pr10mb17864cc3ab4f7ecb8aa9bd09ec...@dm5pr10mb1786.namprd10.prod.outlook.com>

    Content-Type: text/plain; charset="us-ascii"

    For simplicity, I am pasting the guidance for "Use of mechanical 
ventilation (Y/N)" (OBS_GEN) here:

    *       Binary flag to indicate whether the patient was on mechanical 
ventilation during the encounter. Expected primarily for EI and IP encounters, 
but may be present for ED or other encounters.  Partners may need to derive 
based on procedure codes or inpatient flowsheets.

    *       Set OBSGEN_TYPE="PC_COVID", OBSGEN_CODE = 3000 and 
OBSGEN_SOURCE="DR"

    *       If patient was on mechanical ventilation, set RESULT_TEXT="Y"; If 
it is known that the patient was NOT put on mechanical ventilation, set to "N".

    Question:  Are you including invasive and non-invasive ventilation?  CPap, 
BiPap, and intubation / bedside ventilator?
    If anyone has the Charge or CPT codes they are using, that would be really 
helpful.

    Thank you.
    Susan
    Susan Rea, Medical Informaticist
    Data Administrator, PCORnet Intermountain
    Enterprise Analytics
    Intermountain Healthcare
    [email protected]<mailto:[email protected]>    801-694-6343 (cell)




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    ------------------------------

    Message: 2
    Date: Wed, 20 May 2020 13:20:52 +0000
    From: "Mazumder, Narayana" <[email protected]>
    To: Xing Song <[email protected]>, "[email protected]"
            <[email protected]>
    Cc: Jeffrey Statland <[email protected]>
    Subject: RE: Add a discussion item to GPC-dev today (05/05/2020)
    Message-ID: <[email protected]>
    Content-Type: text/plain; charset="utf-8"

    Hi Dr. Song,

    Allina is mapping them to ICD G71.02 and we have ~45 patients.

    Thanks,
    Narayana

    Narayana Mazumder
    Research Informatics Analyst ? Lead / Data Architect
    Clinical Research Informatics and Analytics
    Allina Commons | 2925 Chicago Ave S | Minneapolis, MN 55407
    612.262.6010 | 
[email protected]<mailto:[email protected]>

    From: Gpc-dev <[email protected]> On Behalf Of Xing Song
    Sent: Monday, May 18, 2020 2:46 PM
    To: [email protected]
    Cc: Jeffrey Statland <[email protected]>
    Subject: RE: Add a discussion item to GPC-dev today (05/05/2020)

    Dear GPC sites,


    Here is a second follow-up on the diagnosis coding question for 
Facioscapulohumeral muscular dystrophy (FSHD), as we discussed in the dev-call 
two weeks ago.



    May I know how FSHD is codified in your system (i.e. is it coded as the 
granular IMO terms, or being properly mapped to the ICD10 G71.02 code, or being 
mapped to the SNOMED CT concept 
(https://urldefense.com/v3/__http://bioportal.bioontology.org/ontologies/SNOMEDCT?p=classes&conceptid=399091004))*__;Pw!!H8mHWRdzp34!sjLafRcf1sTZx737TFQZg402MWTSM2lMq-mb4A1Q25jnaoeL8UavlOQTMZcnuao$
  And how many FSHD patients can be identified by that corresponding codes?



    The sites that I am still missing this information from are:

    -        MCW

    -        UIOWA

    -        Intermountain

    -        Allina

    -        MU

    -        UTSW

    -        Indiana

    -        Marshfield



    Since we are trying to catch a LOI submission deadline and this information 
is deemed to be important for the submission, we would really appreciate your 
reply by the end of Wednesday (05/20/2020).



    If you have already replied but I somehow missed it, please also remind me 
again with your answers (and I apologize in advance for that!)

    Thank you very much for sharing the information with us!

    Xing Song, Ph.D.
    Research Assistant Professor
    Center for Medical Informatics and Enterprise Analytics
    University of Kansas Medical Center
    Email: [email protected]<mailto:[email protected]>
    Phone: (913)-588-7605

    From: Xing Song
    Sent: Friday, May 8, 2020 10:31 AM
    To: [email protected]<mailto:[email protected]>
    Cc: Jeffrey Statland <[email protected]<mailto:[email protected]>>; Russ 
Waitman <[email protected]<mailto:[email protected]>>
    Subject: RE: Add a discussion item to GPC-dev today (05/05/2020)

    Dear GPC sites,


    I would like to follow up on the diagnosis coding question for 
Facioscapulohumeral muscular dystrophy (FSHD), as we discussed in the dev-call 
this Tuesday.



    May I know how FSHD is codified in your system (i.e. is it coded as the 
granular IMO terms, or being properly mapped to the ICD10 G71.02 code, or being 
mapped to the SNOMED CT concept 
(https://urldefense.com/v3/__http://bioportal.bioontology.org/ontologies/SNOMEDCT?p=classes&conceptid=399091004))*__;Pw!!H8mHWRdzp34!sjLafRcf1sTZx737TFQZg402MWTSM2lMq-mb4A1Q25jnaoeL8UavlOQTMZcnuao$
  And how many FSHD patients can be identified by that corresponding codes?

    Thank you very much for your reply in advance!

    Xing Song, Ph.D.
    Research Assistant Professor
    Center for Medical Informatics and Enterprise Analytics
    University of Kansas Medical Center
    Email: [email protected]<mailto:[email protected]>
    Phone: (913)-588-7605


    From: Xing Song
    Sent: Tuesday, May 5, 2020 10:08 AM
    To: [email protected]<mailto:[email protected]>
    Subject: Add a discussion item to GPC-dev today (05/05/2020)


    Hi, GPC-dev,



    We are hoping to understand how well Facioscapulohumeral muscular dystrophy 
(FSHD) is coded across GPC sites. As we looked at KUMC?s data (in the forwarded 
email), FSHD is coded by multiple IMO categories which have been grouped under 
very general terms such as ICD9:359.1 and ICD10:71. However, there exists an 
ICD10:71.02 code, which specifically capture the FSHD cohort, but not seem to 
be utilized here at KUMC (and maybe similar issue applies to other GPC sites).



    We want to see if any other GPC sites could have the capability to identify 
the FSHD cohort either with this specific ICD10:71.02 code, or IMO categories 
(as KUMC), or even SNOMED CT concept 
(https://urldefense.com/v3/__http://bioportal.bioontology.org/ontologies/SNOMEDCT?p=classes&conceptid=399091004__;!!H8mHWRdzp34!sjLafRcf1sTZx737TFQZg402MWTSM2lMq-mb4A1Q25jnaoeL8UavlOQTUw0xVHg$

    ), with high sensitivity?



    I actually have also logged a GPC Research Assessment Request for this, 
which probably has already been broadcast to the sites.



    Thank you very much!




    Xing Song, Ph.D.
    Research Assistant Professor
    Center for Medical Informatics and Enterprise Analytics
    University of Kansas Medical Center
    Email: [email protected]<mailto:[email protected]>
    Phone: (913)-588-7605






    From: Russ Waitman <[email protected]<mailto:[email protected]>>
    Sent: Monday, May 4, 2020 4:41 PM
    To: Kiley Higgs <[email protected]<mailto:[email protected]>>; Xing Song 
<[email protected]<mailto:[email protected]>>; Jeffrey Statland 
<[email protected]<mailto:[email protected]>>; Michaela Walker 
<[email protected]<mailto:[email protected]>>
    Cc: Russ Waitman <[email protected]<mailto:[email protected]>>
    Subject: Re: PCORI Grant- FSHD Review



    Note the snomed concept exists:

    
https://urldefense.com/v3/__http://bioportal.bioontology.org/ontologies/SNOMEDCT?p=classes&conceptid=399091004__;!!H8mHWRdzp34!sjLafRcf1sTZx737TFQZg402MWTSM2lMq-mb4A1Q25jnaoeL8UavlOQTUw0xVHg$



    
https://urldefense.com/v3/__https://pcornet.org/pcornet-front-door/__;!!H8mHWRdzp34!sjLafRcf1sTZx737TFQZg402MWTSM2lMq-mb4A1Q25jnaoeL8UavlOQTrq6JYoQ$





    [A screenshot of a cell phone  Description automatically generated][A 
screenshot of text  Description automatically generated]



    Then just know the basic demographics,





    Larger issue how the patients do over time ( prior discussion of wheelchair)

    ?        BMI,

    ?        medical comorbidities ? use elements of a Charlton comorbidity 
score,

    ?        ambulatory or not (CPT code

    ?        Which of these elements are in the CDM versus need to be collected 
prospectively for the study in the registry

    ?        The new standard minimal data set elements from the clinic tests 
(and whether they cold be done via telemed) is the areas where data collection 
would be needed.  These clinic performance measures are often just in the 
clinic note

    o   e.g. Timed Up and Go 
https://urldefense.com/v3/__https://www.ncbi.nlm.nih.gov/medgen/754182__;!!H8mHWRdzp34!sjLafRcf1sTZx737TFQZg402MWTSM2lMq-mb4A1Q25jnaoeL8UavlOQTOUFx_iI$
 )

    o   Brooke Upper Extremity Score

    ?  
https://urldefense.com/v3/__https://www.researchgate.net/figure/Grading-for-Brooke-and-Vignos-Scales_tbl2_224053494__;!!H8mHWRdzp34!sjLafRcf1sTZx737TFQZg402MWTSM2lMq-mb4A1Q25jnaoeL8UavlOQTZgWb2zU$





    Note the wheelchair CPT code seems to be used but underutilized.   The 
HCPCS are not used at UMC



    [cid:[email protected]]





    Russ





    From: [email protected]<mailto:[email protected]>
    When: 4:00 PM - 5:00 PM May 4, 2020
    Subject: PCORI Grant- FSHD Review
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