On Mon, Mar 28, 2011 at 11:40 PM, Ned Horning <horn...@amnh.org> wrote: > Hi Markus M. > > Thanks for the pointer but I'm still having a problem (terminal output > pasted below) and wonder if I'm still accessing v.buffer2. The program stops > because I run out of memory. I have 5.7 GB of physical and 5.8 GB for my > swap and it's not enough. I ran make and make install in the v.buffer > directory and ran configure, make and make install in > /usr/local/src/grass6_devel. I expect I'm doing something stupid but am at a > loss as to how to fix it.
If you ran make in the v.buffer directory and afterwards configure, make and make install in /usr/local/src/grass6_devel, you would end up with v.buffer2. 1. run configure, make, but not make install in /usr/local/src/grass6_devel 2. run make in the v.buffer directory, watch out for errors to make sure it compiles all right 3. run make install in /usr/local/src/grass6_devel, but not again configure and/or make 4. that should give you the original v.buffer > > Any thoughts? > > Ned > > -- > WARNING: Next edge was visited but it is not the first one !!! breaking > loop > WARNING: Next edge was visited but it is not the first one !!! breaking > loop > WARNING: Next edge was visited but it is not the first one !!! breaking > loop > 100% > Writting buffers... > 100% > Building topology for vector map <testBuf>... > Registering primitives... > 1435962 primitives registered > 115977416 vertices registered > Number of nodes: 1435838 > Number of primitives: 1435962 > Number of points: 0 > Number of lines: 0 > Number of boundaries: 1435962 > Number of centroids: 0 > Number of areas: - > Number of isles: - > Snapping boundaries... > Killed > > > On 03/28/2011 07:44 AM, Markus Metz wrote: >> >> On Mon, Mar 28, 2011 at 12:39 PM, Ned Horning<horn...@amnh.org> wrote: >>> >>> Markus, >>> >>> Thanks for fixing the code. I managed to compile v.buffer and I ran it in >>> the grass65 terminal window and these are the errors I got. There were >>> several of the "Next edge was visited...." messages but I only cut out >>> the >>> last couple. Any idea what the problem might be? I'm running on 64 bit >>> Ubuntu. >>> >>> All the best, >>> >>> Ned >>> -- >>> WARNING: Next edge was visited but it is not the first one !!! breaking >>> loop >>> WARNING: Next edge was visited but it is not the first one !!! breaking >>> loop >>> WARNING: Next edge was visited but it is not the first one !!! breaking >>> loop >>> WARNING: Next edge was visited but it is not the first one !!! breaking >>> loop >> >> It seems that this is still v.buffer2, not v.buffer (a bit confusing >> because the stuff in vector/v.buffer2 is compiled as v.buffer, as is >> the stuff in vector/v.buffer). You need to either start grass from the >> source tree or run make install again in order to make use of the >> vector/v.buffer module. >> >> HTH, >> >> Markus M >> >> >>> *** glibc detected *** d.vect: free(): invalid next size (normal): >>> 0x00000000013a5fc0 *** >>> ======= Backtrace: ========= >>> /lib/libc.so.6(+0x775b6)[0x7fc0f26965b6] >>> /lib/libc.so.6(cfree+0x73)[0x7fc0f269ce83] >>> >>> /usr/local/grass-6.5.svn/lib/libgrass_vect.6.5.svn.so(Vect_destroy_line_struct+0x28)[0x7fc0f424f638] >>> d.vect(plot1+0xb0a)[0x40876a] >>> d.vect(main+0x1314)[0x4072d4] >>> /lib/libc.so.6(__libc_start_main+0xfd)[0x7fc0f263dc4d] >>> d.vect[0x403cd9] >>> ======= Memory map: ======== >>> 00400000-0040c000 r-xp 00000000 08:05 206110 >>> /usr/local/grass-6.5.svn/bin/d.vect >>> 0060b000-0060c000 r--p 0000b000 08:05 206110 >>> /usr/local/grass-6.5.svn/bin/d.vect >>> 0060c000-0060d000 rw-p 0000c000 08:05 206110 >>> /usr/local/grass-6.5.svn/bin/d.vect >>> 01398000-013b9000 rw-p 00000000 00:00 0 >>> [heap] >>> 7fc0e4000000-7fc0e4021000 rw-p 00000000 00:00 0 >>> 7fc0e4021000-7fc0e8000000 ---p 00000000 00:00 0 >>> 7fc0e97cd000-7fc0e97d9000 r-xp 00000000 08:05 531120 >>> /lib/libnss_files-2.11.1.so >>> 7fc0e97d9000-7fc0e99d8000 ---p 0000c000 08:05 531120 >>> /lib/libnss_files-2.11.1.so >>> 7fc0e99d8000-7fc0e99d9000 r--p 0000b000 08:05 531120 >>> /lib/libnss_files-2.11.1.so >>> 7fc0e99d9000-7fc0e99da000 rw-p 0000c000 08:05 531120 >>> /lib/libnss_files-2.11.1.so >>> 7fc0e99da000-7fc0e99e4000 r-xp 00000000 08:05 531542 >>> /lib/libnss_nis-2.11.1.so >>> 7fc0e99e4000-7fc0e9be3000 ---p 0000a000 08:05 531542 >>> /lib/libnss_nis-2.11.1.so >>> 7fc0e9be3000-7fc0e9be4000 r--p 00009000 08:05 531542 >>> /lib/libnss_nis-2.11.1.so >>> 7fc0e9be4000-7fc0e9be5000 rw-p 0000a000 08:05 531542 >>> /lib/libnss_nis-2.11.1.so >>> 7fc0e9be5000-7fc0e9bed000 r-xp 00000000 08:05 527981 >>> /lib/libnss_compat-2.11.1.so >>> 7fc0e9bed000-7fc0e9dec000 ---p 00008000 08:05 527981 >>> /lib/libnss_compat-2.11.1.so >>> 7fc0e9dec000-7fc0e9ded000 r--p 00007000 08:05 527981 >>> /lib/libnss_compat-2.11.1.so >>> 7fc0e9ded000-7fc0e9dee000 rw-p 00008000 08:05 527981 >>> /lib/libnss_compat-2.11.1.so >>> 7fc0e9dee000-7fc0e9df1000 r-xp 00000000 08:05 523508 >>> /lib/libgpg-error.so.0.4.0 >>> 7fc0e9df1000-7fc0e9ff0000 ---p 00003000 08:05 523508 >>> /lib/libgpg-error.so.0.4.0 >>> 7fc0e9ff0000-7fc0e9ff1000 r--p 00002000 08:05 523508 >>> /lib/libgpg-error.so.0.4.0 >>> 7fc0e9ff1000-7fc0e9ff2000 rw-p 00003000 08:05 523508 >>> /lib/libgpg-error.so.0.4.0 >>> 7fc0e9ff2000-7fc0ea002000 r-xp 00000000 08:05 134688 >>> /usr/lib/libtasn1.so.3.1.7 >>> 7fc0ea002000-7fc0ea201000 ---p 00010000 08:05 134688 >>> /usr/lib/libtasn1.so.3.1.7 >>> 7fc0ea201000-7fc0ea202000 r--p 0000f000 08:05 134688 >>> /usr/lib/libtasn1.so.3.1.7 >>> 7fc0ea202000-7fc0ea203000 rw-p 00010000 08:05 134688 >>> /usr/lib/libtasn1.so.3.1.7 >>> 7fc0ea203000-7fc0ea21c000 r-xp 00000000 08:05 134634 >>> /usr/lib/libsasl2.so.2.0.23 >>> 7fc0ea21c000-7fc0ea41b000 ---p 00019000 08:05 134634 >>> /usr/lib/libsasl2.so.2.0.23 >>> 7fc0ea41b000-7fc0ea41c000 r--p 00018000 08:05 134634 >>> /usr/lib/libsasl2.so.2.0.23 >>> 7fc0ea41c000-7fc0ea41d000 rw-p 00019000 08:05 134634 >>> /usr/lib/libsasl2.so.2.0.23 >>> 7fc0ea41d000-7fc0ea433000 r-xp 00000000 08:05 531562 >>> /lib/libresolv-2.11.1.so >>> 7fc0ea433000-7fc0ea632000 ---p 00016000 08:05 531562 >>> /lib/libresolv-2.11.1.so >>> 7fc0ea632000-7fc0ea633000 r--p 00015000 08:05 531562 >>> /lib/libresolv-2.11.1.so >>> 7fc0ea633000-7fc0ea634000 rw-p 00016000 08:05 531562 >>> /lib/libresolv-2.11.1.so >>> 7fc0ea634000-7fc0ea636000 rw-p 00000000 00:00 0 >>> 7fc0ea636000-7fc0ea638000 r-xp 00000000 08:05 523515 >>> /lib/libkeyutils-1.2.so >>> 7fc0ea638000-7fc0ea837000 ---p 00002000 08:05 523515 >>> /lib/libkeyutils-1.2.so >>> 7fc0ea837000-7fc0ea838000 r--p 00001000 08:05 523515 >>> /lib/libkeyutils-1.2.so >>> 7fc0ea838000-7fc0ea839000 rw-p 00002000 08:05 523515 >>> /lib/libkeyutils-1.2.so >>> 7fc0ea839000-7fc0ea840000 r-xp 00000000 08:05 134268 >>> /usr/lib/libkrb5support.so.0.1 >>> 7fc0ea840000-7fc0eaa3f000 ---p 00007000 08:05 134268 >>> /usr/lib/libkrb5support.so.0.1 >>> 7fc0eaa3f000-7fc0eaa40000 r--p 00006000 08:05 134268 >>> /usr/lib/libkrb5support.so.0.1 >>> 7fc0eaa40000-7fc0eaa41000 rw-p 00007000 08:05 134268 >>> /usr/lib/libkrb5support.so.0.1 >>> 7fc0eaa41000-7fc0eaa65000 r-xp 00000000 08:05 132675 >>> /usr/lib/libk5crypto.so.3.1 >>> 7fc0eaa65000-7fc0eac65000 ---p 00024000 08:05 132675 >>> /usr/lib/libk5crypto.so.3.1 >>> 7fc0eac65000-7fc0eac66000 r--p 00024000 08:05 132675 >>> /usr/lib/libk5crypto.so.3.1 >>> 7fc0eac66000-7fc0eac67000 rw-p 00025000 08:05 132675 >>> /usr/lib/libk5crypto.so.3.1 >>> 7fc0eac67000-7fc0eac7e000 r-xp 00000000 08:05 527976 >>> /lib/libnsl-2.11.1.so >>> 7fc0eac7e000-7fc0eae7d000 ---p 00017000 08:05 527976 >>> /lib/libnsl-2.11.1.so >>> 7fc0eae7d000-7fc0eae7e000 r--p 00016000 08:05 527976 >>> /lib/libnsl-2.11.1.so >>> 7fc0eae7e000-7fc0eae7f000 rw-p 00017000 08:05 527976 >>> /lib/libnsl-2.11.1.so >>> 7fc0eae7f000-7fc0eae81000 rw-p 00000000 00:00 0 >>> 7fc0eae81000-7fc0eaef6000 r-xp 00000000 08:05 523504 >>> /lib/libgcrypt.so.11.5.2 >>> 7fc0eaef6000-7fc0eb0f5000 ---p 00075000 08:05 523504 >>> /lib/libgcrypt.so.11.5.2 >>> 7fc0eb0f5000-7fc0eb0f6000 r--p 00074000 08:05 523504 >>> /lib/libgcrypt.so.11.5.2 >>> 7fc0eb0f6000-7fc0eb0f9000 rw-p 00075000 08:05 523504 >>> /lib/libgcrypt.so.11.5.2 >>> 7fc0eb0f9000-7fc0eb195000 r-xp 00000000 08:05 134182 >>> /usr/lib/libgnutls.so.26.14.12 >>> 7fc0eb195000-7fc0eb394000 ---p 0009c000 08:05 134182 >>> /usr/lib/libgnutls.so.26.14.12 >>> 7fc0eb394000-7fc0eb39a000 r--p 0009b000 08:05 134182 >>> /usr/lib/libgnutls.so.26.14.12 >>> 7fc0eb39a000-7fc0eb39b000 rw-p 000a1000 08:05 134182 >>> /usr/lib/libgnutls.so.26.14.12 >>> 7fc0eb39b000-7fc0eb3a8000 r-xp 00000000 08:05 132150 >>> /usr/lib/liblber-2.4.so.2.5.4 100% >>> Writting buffers... >>> 100% >>> Building topology for vector map<testBuf2>... >>> Registering primitives... >>> 1435962 primitives registered >>> 115977416 vertices registered >>> Number of nodes: 1435838 >>> Number of primitives: 1435962 >>> Number of points: 0 >>> Number of lines: 0 >>> Number of boundaries: 1435962 >>> Number of centroids: 0 >>> Number of areas: - >>> Number of isles: - >>> Snapping boundaries... >>> Killed >>> GRASS 6.5.svn (NHD_Test):~> >>> >>> >>> On 03/27/2011 02:51 PM, Markus Neteler wrote: >>>> >>>> On Sun, Mar 27, 2011 at 3:57 PM, Ned Horning<horn...@amnh.org> wrote: >>>>> >>>>> Hi Markus, >>>>> >>>>> Thanks for your help. I am trying to follow your instruction but ran >>>>> into >>>>> a >>>>> problem compiling v.buffer. I used svn to download grass 6.5 into >>>>> /usr/local/src and it appears to have compiled just fine and grass65 >>>>> seems >>>>> to be working. To compile v.buffer I tried: >>>>> sudo make MODULE_TOPDIR=/usr/local/grass-6.5.svn/ >>>>> >>>>> from the /usr/local/src/grass6_devel/vector/v.buffer directory but that >>>>> didn't work. I pasted the error message below. >>>> >>>> I have fixed to typo style bugs. Now it compiles, please try again. >>>> >>>> Markus >>>> >>> _______________________________________________ >>> grass-user mailing list >>> grass-user@lists.osgeo.org >>> http://lists.osgeo.org/mailman/listinfo/grass-user >>> > > _______________________________________________ grass-user mailing list grass-user@lists.osgeo.org http://lists.osgeo.org/mailman/listinfo/grass-user