PS: googling AMBER FF10 + GROMACS does give (at least) one relevant result: http://pubs.rsc.org/en/Content/ArticlePDF/2013/CP/c2cp44100d
They may have something useful and may be willing to share (and it would certainly be useful to have it in the contrib FF section as well). Cheers, -- Szilárd On Thu, Nov 28, 2013 at 4:26 PM, Thomas Piggot <[email protected]> wrote: > In addition to where Szilard said to look, you can also try looking for > force fields on the user contributions part of the GROMACS website: > > http://www.gromacs.org/Downloads/User_contributions/Force_fields > > If you need to use AMBER99SB force field with the ParmBSC0 nucleic acid > parameters, this combination can be found there. > > Cheers > > Tom > > > On 11/27/2013 02:06 PM, Szilárd Páll wrote: >> >> Hi, >> >> If you look at share/gromacs/top/ in the GROMACS installation >> directory you can see which FF-s are included and amberff10 is not >> there, so the answer is no. >> >> Cheers, >> -- >> Szilárd >> >> >> On Wed, Nov 27, 2013 at 12:33 AM, gromacs query <[email protected]> >> wrote: >>> >>> Dear All >>> >>> I never used Gromacs for nucleic acids. In AMBER there is ff10 >>> (ff99SB+parmbasco+ also one needs to add ions according to water used by >>> Thomas Cheatham et al.) >>> >>> does gromacs include this force field (AMBER ff implemented in gromacs)? >>> >>> regards >>> JIo >>> -- >>> Gromacs Users mailing list >>> >>> * Please search the archive at >>> http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! >>> >>> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists >>> >>> * For (un)subscribe requests visit >>> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or >>> send a mail to [email protected]. > > > -- > Dr Thomas Piggot > University of Southampton, UK. > > > -- > Gromacs Users mailing list > > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a > mail to [email protected]. -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to [email protected].
