For gromos ff you can also use the ATB server. From Alan Mark on Brisbane. It combine typography and non-bonded parameters all at once.
It is not perfect but pretty good. > On Dec 8, 2013, at 8:27, Mahboobeh Eslami <mahboobeh.esl...@yahoo.com> wrote: > > hi all my friends > I use PRODRG and antechmber for building topology and coordinate files for my > ligand separately. > i want to use GROMOS force field so i must to use the topology from PRODRG > server. can i use the topology of antechamber for charge correction in > topology fiel from PRODRG . > In general, are special principlesessential for charge correction in topology > file from PRODRG > thanks for your help > -- > Gromacs Users mailing list > > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a > mail to gmx-users-requ...@gromacs.org. -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
