Hi All, I have simulated a membrane proteins system using coarse grain model. after simulations when i removed periodic boundary from my simulations box but the protein is moving up and down in the box ? I have tried all the options nojump ,mol,whole ...etc. no options seems to work.
there is something wrong with my trajectory or it is normal with CG ? thanks in advance :) -- Nikhil Agrawal Project Fellow Institute of Genomic & Integrative Biology (IGIB) Mathura Road New Delhi 110020 -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
