On 3/6/14, 1:04 AM, Prajisha Sujaya wrote:
i am gettng error while doing simulation of Trna molecule i have used gromacs and force field CHARMM27 all-atom force field (with CMAP) - version 2.0 "Residue 'ADE' not found in residue topology database". How to solve this error
http://www.gromacs.org/Documentation/Errors#Residue_'XXX'_not_found_in_residue_topology_database Use correct residue names - DA, DT, etc for DNA and RA, RU, etc for RNA. -Justin -- ================================================== Justin A. Lemkul, Ph.D. Ruth L. Kirschstein NRSA Postdoctoral Fellow Department of Pharmaceutical Sciences School of Pharmacy Health Sciences Facility II, Room 601 University of Maryland, Baltimore 20 Penn St. Baltimore, MD 21201 jalem...@outerbanks.umaryland.edu | (410) 706-7441 http://mackerell.umaryland.edu/~jalemkul ================================================== -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
