On 5/10/14, 4:23 AM, Balasubramanian Suriyanarayanan wrote:
Dear Users

If membrane protein ligand complex needs to simulated in lipid bilayers
then how to introduce ligand and at what step?


It's exactly like http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin/gmx-tutorials/complex/index.html, then use the complex to build the membrane system.

-Justin

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==================================================

Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 601
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalem...@outerbanks.umaryland.edu | (410) 706-7441
http://mackerell.umaryland.edu/~jalemkul

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