On 6/18/14, 11:43 AM, fatemeh ramezani wrote:
Dear Users
I run this command:

nohup  mpirun -np 8  mdrun_mpi  -s x.tpr -o x.trr -c x.pdb -g x.log -e x.edr   &

Despite the use of nohup and &, mdrun will stop after closing the putty window.

Can anyone help me to solve this problem?


Google knows. Apparently nohup in Putty is a known problem. In any case, this is not a Gromacs problem, so you should be searching for solutions in more appropriate places.

-Justin

--
==================================================

Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 601
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalem...@outerbanks.umaryland.edu | (410) 706-7441
http://mackerell.umaryland.edu/~jalemkul

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