You may download the relevant executables from the following links: ftp://ftp.cmbi.ru.nl/pub/software/dssp/dssp-2.0.4-linux-amd64 ftp://ftp.cmbi.ru.nl/pub/software/dssp/dssp-2.0.4-linux-i386 ftp://ftp.cmbi.ru.nl/pub/software/dssp/dssp-2.0.4-win32.exe
before using the do_dssp module of Gromacs, export the path to the above executable dssp as: export dssp=/path/to/dssp/executable then run the do_dssp as usual. *------------------------Thanks and Regards,Bipin Singh* On Mon, Aug 25, 2014 at 7:38 AM, Nikolaos Michelarakis <nm...@york.ac.uk> wrote: > Hi, > > Thank you for your answer, could you please give me some more info on where > to find them and how to use them for the whole trajectory? > > Cheers, > > Nicholas > -- > Gromacs Users mailing list > > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before > posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > send a mail to gmx-users-requ...@gromacs.org. > -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.