On Tue, Sep 2, 2014 at 10:59 AM, soumadwip ghosh <soumadwipgh...@gmail.com> wrote: > Hello, > > I am a newbie to MD simulation. We are working in the direction of > finding the molecular origin of internal friction of protein folding. For > this we have to run folding simulations at different solvent viscosity and > plot protein reconfiguration time against solvent viscosity. Currently, we > have been using TIP3P water molecules for simulations run on GROMACS 4.5.6. > I wwill be highly grateful if someone tells me how to change the viscosity > of water.
To change water viscosity, you must be assigned as God. Pick up another FFM. Dr. Vitaly V. Chaban Виталий Витальевич ЧАБАН > > Best, > Soumadwip. > -- > Gromacs Users mailing list > > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a > mail to gmx-users-requ...@gromacs.org. -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
