No, I don't mean noise :). What I mean is that next frame appears on the screen before I can take a good look at previous one. So imagine that you make a presentation and you change each slide after 0.1 s. You can't have a good look at it so let's say I need 2 s to have a good look.
I hope now you understand better what I mean. 2014-09-03 14:41 GMT+01:00 andrea <andrea.spital...@iit.it>: > Hi, > when you say "too quickly" are you referring to the "noise" I guess. > If it is the case, you could try to filter you xtc either with g_filter in > order to reduce the fluctuactions or in vmd itself you can smooth the xtc > in the graphical representations -> trajectory tab -> trajectory smooting > (2 or 3 should be enough) > > hope it helps > > and > > > > On 03/09/2014 15:35, Dawid das wrote: > >> Dear Gromacs experts, >> >> I have a question not regarding Gromacs itself but maybe you found a >> solution. >> >> I have already solved this problem but not for GROMACS files. >> I want to make a trajectory movie using VMD, but following frames appear >> too quickly and it is very hard to actually see and analyze how >> chromophore >> structure changes over time. So I want to make the movie last longer and >> the frames to be be displayed for a longer timer. >> >> I did it for Tinker trajectory snapshots by uploading the same snapshot 5 >> or 7 times but how to do it with *gro and *trr files from Gromacs? >> >> Best wishes, >> Dawid Grabarek >> >> PS Maybe you suggest to use different prorgram? >> > > -- > ------------------------------------------------------- > Andrea Spitaleri PhD > Principal Investigator AIRC > D3 - Drug Discovery & Development > Istituto Italiano di Tecnologia > Via Morego, 30 16163 Genova > cell: +39 3485188790 > http://www.iit.it/en/d3-people/andrea-spitaleri.html > ORCID: http://orcid.org/0000-0003-3012-3557 > > -- > Gromacs Users mailing list > > * Please search the archive at http://www.gromacs.org/ > Support/Mailing_Lists/GMX-Users_List before posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > send a mail to gmx-users-requ...@gromacs.org. > -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.