Hi Gromacs users, I have a confined system in both x and y directions. Gromacs offer 3 options for pbc=xyz or no or xy. Is there a way we can implement the pbc only along the z direction ?
As I am using cutoff methods for electrostatistics one way to do this is to put some empty space (larger than the biggest interaction cutoff) and apply pbc in all 3 directions. But this would hamper the efficiency due to the way the domain decomposition is done. Any better alternatives ? Thanks. -- Cheers !!! Sridhar Kumar Kannam :) -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
