On 10/30/14 4:55 AM, Kannan S wrote:
Dear all Gromacs users, I am running MD simulation using Gromacs in Cluster. In my 3.5ns, it goes smooth and after that when i view my md.log file, it shows that "File input/output error:Cannot rename checkpoint file; maybe you are out of quota?" Please let me know how to rectify the error... But the MD job is running...
Either you're out of disk space (note that "quota" has been changed to "disk space" in recent versions of the code for clarity) or your file system had a blip that prevented writing of the .cpt file.
-Justin -- ================================================== Justin A. Lemkul, Ph.D. Ruth L. Kirschstein NRSA Postdoctoral Fellow Department of Pharmaceutical Sciences School of Pharmacy Health Sciences Facility II, Room 629 University of Maryland, Baltimore 20 Penn St. Baltimore, MD 21201 jalem...@outerbanks.umaryland.edu | (410) 706-7441 http://mackerell.umaryland.edu/~jalemkul ================================================== -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.