Hi, Strip the solvent, then you can use editconf to put the origin of both boxes at (0,0,0), then translate one of them, then use a text editor to put everything in the same coordinate file (updating atom counts and box vectors). Then solvate. Doing this on a solvated system is the path to the Dark Side...
Mark On Mon, Feb 2, 2015 at 3:12 PM, BIRD <vgsplay...@163.com> wrote: > hello all > I have made two solvent boxes with DIFFERENT protein in each box, the box > have the same X-Y-Z length. > I want to combine two boxes to one large box at one dimension like X or Y > Witch command could do that?? > > best regard > Cao, PhD > > Institute of Physics > Nankai University > Tianjin, China > -- > Gromacs Users mailing list > > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before > posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > send a mail to gmx-users-requ...@gromacs.org. > -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
